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Protected: HPC Software

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Alphabetical List of Software

  • adios2
    amber
    ansys
    autodock-vina
    bcl2fastq
    bdftopcf
    beast2
    blast
    boost
    bowtie
    bowtie2
    bwa
    c-blosc
    cellranger
    cmake
    cmg
    comsol
    cp2k
    cuda
    cufflinks
    ddt
    eigen
    exabayes
    exonerate
    fastqc
    fastx-toolkit
    fftw
    font-util
    fontconfig
    fontsproto
    gatk
    gaussian
    gcc
    git
    gnuparallel
    gnuplot
    gperf
    gromacs
    gsl
    hdf5
    hmmer
    hwloc
    hybpiper
    hypre
    intel
    jdk
    kokkos
    lammps
    libbeagle
    libcerf
    libfontenc
    libgd
    libgtextutils
    libidn2
    libuuid
    libxfont
    libxpm
    libzmq
    lz4
    mathematica
    matlab
    mesa
    metis
    mkfontdir
    mkfontscale
    mothur
    mpich
    mrbayes
    mumps
    muscle
    mvapich2
    namd
    netcdf-c
    netcdf-cxx
    netcdf-fortran
    nwchem
    octave
    openbabel
    openfoam
    openmpi
    orca
    parallel
    parallel-netcdf
    paraview
    parmetis
    pcre2
    perl
    petsc
    pgi
    python
    quantum-espresso
    r
    raxml
    revbayes
    samtools
    scotch
    snappy
    soapdenovo-trans
    soapdenovo2
    spades
    star
    suite-sparse
    superlu-dist
    swig
    tau
    trinity
    util-macros
    valgrind
    vmd
    vsearch
    xproto
    xtrans

Software Listing by Cluster

  • Deepbayou

    cmake
    cuda
    ddt
    gcc
    hwloc
    intel
    jdk
    matlab
    mpich
    mvapich2
    openmpi
    perl
    pgi
    python
    r

  • Qb2

    adios2
    amber
    autodock-vina
    beast2
    blast
    boost
    bowtie2
    bwa
    c-blosc
    cmake
    cuda
    cufflinks
    ddt
    exabayes
    exonerate
    fftw
    gatk
    gaussian
    gcc
    git
    gnuparallel
    gnuplot
    gromacs
    gsl
    hdf5
    hwloc
    hybpiper
    hypre
    intel
    jdk
    lammps
    libidn2
    lz4
    matlab
    metis
    mothur
    mpich
    mumps
    muscle
    mvapich2
    namd
    netcdf-c
    netcdf-cxx
    netcdf-fortran
    nwchem
    openfoam
    openmpi
    orca
    parallel
    parallel-netcdf
    paraview
    parmetis
    pcre2
    perl
    petsc
    pgi
    python
    quantum-espresso
    r
    raxml
    revbayes
    samtools
    scotch
    snappy
    soapdenovo-trans
    soapdenovo2
    spades
    star
    suite-sparse
    superlu-dist
    tau
    trinity
    valgrind
    vmd
    vsearch

  • Qb3

    adios2
    amber
    autodock-vina
    bdftopcf
    beast2
    blast
    boost
    bowtie
    bowtie2
    bwa
    cmake
    cp2k
    cuda
    cufflinks
    ddt
    eigen
    fastx-toolkit
    fftw
    font-util
    fontconfig
    fontsproto
    gatk
    gaussian
    gcc
    git
    gnuplot
    gperf
    gromacs
    hdf5
    hmmer
    hwloc
    hypre
    intel
    jdk
    kokkos
    lammps
    libbeagle
    libcerf
    libfontenc
    libgd
    libgtextutils
    libidn2
    libuuid
    libxfont
    libxpm
    libzmq
    matlab
    mesa
    metis
    mkfontdir
    mkfontscale
    mothur
    mpich
    mrbayes
    mumps
    muscle
    mvapich2
    namd
    netcdf-c
    netcdf-cxx
    netcdf-fortran
    nwchem
    octave
    openbabel
    openfoam
    openmpi
    parallel
    parallel-netcdf
    paraview
    parmetis
    pcre2
    perl
    petsc
    pgi
    python
    quantum-espresso
    r
    raxml
    revbayes
    samtools
    scotch
    soapdenovo-trans
    soapdenovo2
    spades
    suite-sparse
    superlu-dist
    swig
    tau
    trinity
    util-macros
    valgrind
    vmd
    xproto
    xtrans

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